基于谱效关系、网络药理学和分子对接技术研究藏药湿生扁蕾改善小鼠肝纤维化的有效成分及靶点预测

    Effective Components and Target Prediction of Tibetan Medicine Gentianopsis Paludosa in Ameliorating Liver Fibrosis in Mice Based on Spectrum-effect Relationship, Network Pharmacology and Molecular Docking Technology

    • 摘要:
      目的 基于谱效关系、网络药理学与分子对接探讨藏药湿生扁蕾抗肝纤维化的有效成分和潜在作用靶点。
      方法 采用HPLC构建10批湿生扁蕾药材的指纹图谱,通过聚类分析及主成分分析对不同批次样品进行质量评价。选取130只8周龄SPF级C57BL/6J雄性小鼠,分为对照组、模型组、阳性对照组、不同批次湿生扁蕾给药组(S1~S10组),每组10只。除对照组外,其余各组小鼠采用腹腔注射25% CCl4橄榄油溶液进行造模,每周3次,持续8周,构建肝纤维化模型。自造模第3周起,阳性对照组每日灌胃水飞蓟素54.6 mg·kg−1,给药组每日灌胃不同批次湿生扁蕾提取物,给药剂量折合生药量为3.094 g·kg−1,连续给药6周;模型组与对照组同期灌胃等体积溶剂。末次给药后,检测小鼠血清肝功能及肝纤维化标志物指标。对肝组织进行病理学分析,采用Metavir系统评分,运用免疫组化法检测α-平滑肌肌动蛋白(α-smooth muscle actin,α-SMA)、Ⅰ型胶原蛋白(Collagen Ⅰ)表达水平,综合评价其抗肝纤维化疗效。以肝组织纤维化评分、α-SMA及CollagenⅠ蛋白表达水平为药效指标,以10个共有色谱峰峰面积为自变量,分别采用灰色关联度分析(grey relational analysis,GRA)(关联度> 0.70)和偏最小二乘回归分析(partial least-squares regression,PLSR)(VIP>1且回归系数为负)筛选与各指标相关的色谱峰,取2种方法筛选结果的交集,再整合3个指标的交集结果,所得色谱峰对应成分即为湿生扁蕾抗肝纤维化的有效成分。以谱效关系筛选得到的湿生扁蕾抗肝纤维化潜在药效成分为研究对象,通过TCMSP、PubChem等数据库预测成分靶点,通过GeneCards数据库获取抗肝纤维化作用的疾病靶点,利用Venny平台获得交集靶点,采用String数据库及Cytoscape3.9.1软件构建蛋白-蛋白相互作用网络,筛选出核心靶点;对交集靶点进行GO和KEGG富集分析,并利用AutoDock Vina软件对潜在药效成分与核心靶点进行分子对接,从而初步探讨湿生扁蕾抗肝纤维化的潜在作用靶点。
      结果 10批湿生扁蕾药材HPLC指纹图谱相似度在0.756~0.997,共标定10个共有峰,其中4个经对照品指认为异荭草苷、当药黄素、木犀草素和芹菜素,10批湿生扁蕾聚为3类;谱效关联分析显示,共有峰F1(异荭草苷)、F3(当药黄素)、F4(未指认)、F8(芹菜素)与湿生扁蕾抗肝纤维化药效密切相关。网络药理学预测发现,已指认成分异荭草苷、当药黄素、芹菜素抗肝纤维化的核心靶点为TP53、AKT1、IL6、STAT3、TNF、MAPK8,主要富集于AGE-RAGE、HIF-1、IL-17及TNF等多条信号通路;分子对接结果显示,3个成分与核心靶点TP53、AKT1之间的结合性能最优(结合能均<−7.0 kcal·mol−1)。
      结论 本研究通过谱效关系分析发现,异荭草苷、当药黄素、芹菜素及F4(未指认)为湿生扁蕾抗肝纤维化的潜在活性成分;结合网络药理学与分子对接结果初步证实,其可能通过作用于TP53、AKT1等核心靶点,调控AGE-RAGE、HIF-1、IL-17及TNF等多条信号通路,进而发挥抗纤维化作用。

       

      Abstract:
      OBJECTIVE To explore the effective components and potential targets of the Tibetan medicine Gentianopsis paludosa against liver fibrosis based on spectrum-effect relationship, network pharmacology, and molecular docking.
      METHODS HPLC was used to establish the fingerprints of 10 batches of Gentianopsis paludosa medicinal materials. Custer analysis and principal component analysis were applied to evaluate the quality of samples from different batches. A total of 130 eight-week-old SPF male C57BL/6J mice were divided into control group, model group, positive control group, and Gentianopsis paludosa treatment groups(S1–S10), with 10 mice in each group. Except for the control group, mice in all other groups were intraperitoneally injection with 25% CCl4 olive oil solution 3 times per week for 8 weeks to establish the liver fibrosis model. From the 3rd week of modeling, the positive control group was intragastrically given silymarin at 54.6 mg·kg–1 daily. The treatment groups were intragastrically administered extracts of different batches of Gentianopsis paludosa at a crude drug dose of 3.094 g·kg−1 daily for 6 consecutive weeks, while the model group and control group were given an equal volume of solvent at the same time. After the final administration, the serum liver function and liver fibrosis markers of mice were measured. Liver tissues were subjected to histopathological analysis and scored by the Metavir system. The expression levels of α-smooth muscle actin(α-SMA) and Collagen Ⅰwere detected by immunohistochemistry, so as to comprehensively evaluate its anti-liver-fibrosis efficacy. The liver tissue fibrosis pathological scores and protein expression levels of α-SMA and Collagen Ⅰ were taken as pharmacodynamic indices, and the peak areas of 10 common chromatographic peaks were used as independent variables. Grey relational analysis(GRA, relational degree>0.70) and partial least-squares regression(PLSR, VIP>1 and negative regression coefficient) were respectively applied to screen the chromatographic peaks associated with each index. The components corresponding to the obtained chromatographic peaks were identified as the active components of Gentianopsis paludosa against liver fibrosis. The intersection of screening results from the 2 methods was obtained, and then the intersections results of the 3 indices were merged. The potential active components of Gentianopsis paludosa against liver fibrosis screened via spectrum-effect relationship were taken as research objects. Component targets were predicted using databases including TCMSP, PubChem, and disease targets for anti-liver-fibrosis were obtained from the GeneCards database. Intersection targets were identified using Venny platform, and a protein-protein interaction(PPI) network was constructed using the String database and Cytoscape 3.9.1 software to screen core targets. GO and KEGG enrichment analyses were performed on the intersection targets. Molecular docking between the potential active components and core targets was carried out using AutoDock Vina software to preliminarily explore the potential action targets of Gentianopsis paludosa against liver fibrosis.
      RESULTS The HPLC fingerprint similarities of 10 batches of Gentianopsis paludosa medicinal materials ranged from 0.756 to 0.997. A total of 10 common peaks were identified, 4 of which were assigned as isoorientin, swertisin, luteolin, and apigenin by reference standards. The 10 batches of Gentianopsis paludosa were clustered into 3 categories. Spectrum-effect correlation analysis showed that the common peaks F1(isoorientin), F3(swertisin), F4(unidentified) and F8(apigenin) were closely associated with the anti-liver fibrosis efficacy of Gentianopsis paludosa. Network pharmacology prediction revealed that the core targets of the identified components(isoorientin, swertisin, and apigenin) against liver fibrosis were TP53, AKT1, IL6, STAT3, TNF, and MAPK8, which were mainly enriched in multiple signaling pathways including AGE-RAGE, HIF-1, IL-17, and TNF. Molecular docking results showed that 3 components exhibited the best binding affinity to the core targets TP53 and AKT1, with binding energies all <−7.0 kcal·mol−1.
      CONCLUSION This study found through spectrum-effect relationship analysis that isoorientin, swertisin, apigenin, and F4(unidentified) are potential active components of Gentianopsis paludosa against liver fibrosis. Combined with the results of network pharmacology and molecular docking, it is preliminarily confirmed that Gentianopsis paludosa may exert its anti-fibrotic effects by acting on core targets such as TP53 and AKT1, and regulating multiple signaling pathways including AGE-RAGE, HIF-1, IL-17, and TNF.

       

    /

    返回文章
    返回